| System Type | Settings Name | Units | Init | Priors | Parameter Bounds | Fixed Parameters | Solver Args |
|---|---|---|---|---|---|---|---|
| BMSS, LogicGate, ORgate | __default__ | {'syn_mRNA1': 'molL-1min-1', 'syn_mRNA2': 'molL-1min-1', 'syn_mRNA3': 'molL-1min-1', 'syn_Pep': 'min-1', 'deg_mRNA': 'min-1', 'deg_Pep': 'min-1', 'Pepmax': 'molL-1', 'state1': 'dimensionless', 'state2': 'dimensionless'} | {1: [0, 0, 0, 0, 0, 0]} | {'syn_mRNA1': [], 'syn_mRNA2': [], 'syn_mRNA3': [], 'syn_Pep': [], 'deg_mRNA': [], 'deg_Pep': [], 'Pepmax': [], 'state1': [], 'state2': []} | {'syn_mRNA1': [5e-08, 5e-06] , 'syn_mRNA2': [5e-08, 5e-06] , 'syn_mRNA3': [5e-08, 5e-06] , 'deg_mRNA': [0.01, 0.5] , 'syn_Pep': [0, 0.02] , 'deg_Pep': [0.001, 0.02] , 'Pepmax': [5e-08, 5e-06] , 'state1': [0, 1] , 'state2': [0, 1] } | ['deg_mRNA'] | {'rtol': 1.49012e-08, 'atol': 1.49012e-08, 'tcrit': [], 'h0': 0.0, 'hmax': 0.0, 'hmin': 0.0, 'mxstep': 0} |
